Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDR47253.1Interferon-induced transmembrane protein; KEGG: btk:BT9727_2122 3.3e-06 pbp1A; penicillin-binding protein 1A K05366; COG: NOG16607 non supervised orthologous group. (494 aa)    
Predicted Functional Partners:
EDR47057.1
KEGG: lmf:LMOf2365_1848 0.0085 protein kinase, putative K08884.
  
 
 0.892
EDR47254.1
Hypothetical protein; COG: NOG15853 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.26.
 
     0.884
EDR47510.1
Hypothetical protein; KEGG: nme:NMB0700 1.4e-14 IgA-specific serine endopeptidase K01347; COG: COG1340 Uncharacterized archaeal coiled-coil protein; Psort location: Extracellular, score: 7.62.
 
  
 0.839
EDR45820.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.26.
  
 
 0.713
EDR48273.1
Hypothetical protein; KEGG: eci:UTI89_C1627 1.5e-05 entS; EntS/YbdA MFS transporter; COG: NOG04032 non supervised orthologous group; Psort location: Cellwall, score: 9.98.
 
     0.568
EDR47252.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.553
ispD
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).
       0.439
EDR48568.1
Copper-exporting ATPase; KEGG: tde:TDE0008 2.6e-188 copper-translocating P-type ATPase K01533; COG: COG2217 Cation transport ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.413
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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