STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47266.1Hypothetical protein; KEGG: cal:orf19.2410 7.1e-09 IMH1; involved in vesicular transport K01553; COG: COG1511 Predicted membrane protein; Psort location: Cellwall, score: 9.18. (681 aa)    
Predicted Functional Partners:
EDR47740.1
Putative ATP synthase F0, A subunit; COG: COG1033 Predicted exporters of the RND superfamily; Psort location: CytoplasmicMembrane, score: 9.99.
   
 0.823
EDR47741.1
Transcriptional regulator, TetR family; KEGG: bcl:ABC2937 0.00011 NADH dehydrogenase K03885; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score: 8.87.
 
    0.672
EDR47267.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
 
    0.582
EDR47268.1
KEGG: ret:RHE_CH02609 1.1e-43 probable peptide ABC transporter, ATP-binding protein K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
    0.530
EDR47265.1
Hypothetical protein; KEGG: bcz:BCZK0951 2.6e-78 uvrD; ATP-dependent DNA helicase replicase K01529; COG: COG3973 Superfamily I DNA and RNA helicases; Psort location: Cytoplasmic, score: 8.87.
       0.423
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.