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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47276.1Hemerythrin HHE cation binding domain protein; COG: COG2703 Hemerythrin; Psort location: Cytoplasmic, score: 8.87. (140 aa)    
Predicted Functional Partners:
EDR48218.1
Hypothetical protein; KEGG: abo:ABO_0442 8.9e-07 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: Cytoplasmic, score: 8.87.
 
  
  0.918
EDR46541.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: vfi:VF0494 1.4e-45 sensory transduction protein kinase; COG: COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; Psort location: Cytoplasmic, score: 8.87.
  
 
  0.802
EDR48417.1
Hypothetical protein.
   
  0.759
EDR47274.1
Glycerophosphodiester phosphodiesterase family protein; KEGG: ilo:IL2303 5.2e-16 ugpQ; glycerophosphoryl diester phosphodiesterase K01126; COG: COG0584 Glycerophosphoryl diester phosphodiesterase; Psort location: Cytoplasmic, score: 8.87.
       0.581
EDR47275.1
Hypothetical protein; KEGG: pen:PSEEN0708 0.0070 tyrosine phosphatase K01112; COG: COG0671 Membrane-associated phospholipid phosphatase; Psort location: CytoplasmicMembrane, score: 9.99.
       0.581
EDR47755.1
Flavodoxin; KEGG: syn:sll0219 3.9e-08 potential FMN-protein; COG: COG0716 Flavodoxins; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.525
EDR47310.1
Metallo-beta-lactamase domain protein; KEGG: eci:UTI89_C3072 1.4e-38 norV; anaerobic nitric oxide reductase flavorubredoxin; COG: COG0426 Uncharacterized flavoproteins; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.525
EDR47273.1
Lipid kinase, YegS/Rv2252/BmrU family; KEGG: cal:orf19.5257 7.4e-08 LCB4; sphingolipid long chain base kinase K04718; COG: COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase; Psort location: Cytoplasmic, score: 8.87.
       0.508
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
    
 
 0.447
EDR46191.1
Hypothetical protein; COG: COG1716 FOG: FHA domain; Psort location: Cytoplasmic, score: 8.87.
  
  
  0.409
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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