STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47297.1Aminopeptidase I zinc metalloprotease (M18); KEGG: tde:TDE0829 4.3e-92 aspartyl aminopeptidase, putative K01269; COG: COG1362 Aspartyl aminopeptidase; Psort location: Cytoplasmic, score: 8.87. (473 aa)    
Predicted Functional Partners:
EDR47298.1
Hypothetical protein; KEGG: sec:SC1961 4.7e-11 fliB; N-methylation of lysine residues in flagellin K00599; COG: NOG18602 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.607
EDR47299.1
KEGG: syd:Syncc9605_0321 2.4e-66 elongation factor EF-2 K02355; COG: COG0480 Translation elongation factors (GTPases); Psort location: Cytoplasmic, score: 9.98.
       0.605
EDR47300.1
PAP2 family protein; KEGG: aci:ACIAD0554 7.9e-13 putative phosphatidylglycerophosphatase B (PgpB) K01094; COG: COG0671 Membrane-associated phospholipid phosphatase; Psort location: CytoplasmicMembrane, score: 9.26.
       0.549
EDR47296.1
Putative permease; KEGG: bcz:BCZK0244 3.5e-97 guanine-hypoxanthine permease; xanthine/uracil permease family protein K06901; COG: COG2252 Permeases; Psort location: CytoplasmicMembrane, score: 9.99.
       0.442
EDR47301.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.410
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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