STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47298.1Hypothetical protein; KEGG: sec:SC1961 4.7e-11 fliB; N-methylation of lysine residues in flagellin K00599; COG: NOG18602 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (430 aa)    
Predicted Functional Partners:
EDR47299.1
KEGG: syd:Syncc9605_0321 2.4e-66 elongation factor EF-2 K02355; COG: COG0480 Translation elongation factors (GTPases); Psort location: Cytoplasmic, score: 9.98.
       0.773
EDR47300.1
PAP2 family protein; KEGG: aci:ACIAD0554 7.9e-13 putative phosphatidylglycerophosphatase B (PgpB) K01094; COG: COG0671 Membrane-associated phospholipid phosphatase; Psort location: CytoplasmicMembrane, score: 9.26.
  
    0.699
EDR47297.1
Aminopeptidase I zinc metalloprotease (M18); KEGG: tde:TDE0829 4.3e-92 aspartyl aminopeptidase, putative K01269; COG: COG1362 Aspartyl aminopeptidase; Psort location: Cytoplasmic, score: 8.87.
       0.607
EDR46413.1
Hypothetical protein; COG: NOG17507 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.582
EDR47301.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.580
EDR45977.1
Tetratricopeptide repeat protein; KEGG: eci:UTI89_C2868 4.9e-21 yphG; hypothetical protein YphG K00754; COG: NOG06209 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.574
EDR46310.1
LysM domain protein; KEGG: lsl:LSL_0304 0.00017 phage lysin K01185; COG: COG1652 Uncharacterized protein containing LysM domain.
  
     0.504
EDR45406.1
Sigma-70, region 4; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.453
mprF
Hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
  
     0.448
EDR46690.1
Hypothetical protein; KEGG: sab:SAB1265c 1.1e-11 probable nitric oxide reductase protein K00377; COG: COG4548 Nitric oxide reductase activation protein; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.404
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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