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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47301.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (283 aa)    
Predicted Functional Partners:
EDR47087.1
NlpC/P60 family protein; KEGG: bce:BC5234 2.5e-20 N-acetylmuramoyl-L-alanine amidase K01446; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins); Psort location: Extracellular, score: 9.73.
  
     0.604
EDR47298.1
Hypothetical protein; KEGG: sec:SC1961 4.7e-11 fliB; N-methylation of lysine residues in flagellin K00599; COG: NOG18602 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.580
EDR47518.1
Hypothetical protein; KEGG: rno:309804 1.3e-25 Cdc2l6_predicted; cell division cycle 2-like 6 (CDK8-like) (predicted) K02208; COG: COG1340 Uncharacterized archaeal coiled-coil protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.576
EDR47651.1
COG: COG4824 Phage-related holin (Lysis protein); Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.570
EDR47300.1
PAP2 family protein; KEGG: aci:ACIAD0554 7.9e-13 putative phosphatidylglycerophosphatase B (PgpB) K01094; COG: COG0671 Membrane-associated phospholipid phosphatase; Psort location: CytoplasmicMembrane, score: 9.26.
       0.559
EDR45355.1
Hypothetical protein; KEGG: spj:MGAS2096_Spy0193 1.2e-11 S-layer protein.
  
     0.533
EDR47299.1
KEGG: syd:Syncc9605_0321 2.4e-66 elongation factor EF-2 K02355; COG: COG0480 Translation elongation factors (GTPases); Psort location: Cytoplasmic, score: 9.98.
       0.509
EDR47209.1
Hypothetical protein.
  
     0.500
EDR46848.1
Phage/plasmid primase, P4 family domain protein; KEGG: hwa:HQ4022A 3.5e-14 putative P4-specific DNA primase; COG: COG3378 Predicted ATPase; Psort location: Cytoplasmic, score: 8.87.
  
     0.499
EDR46856.1
Relaxase/mobilization nuclease domain protein; KEGG: xtr:407915 0.0022 ppig; peptidyl-prolyl isomerase G (cyclophilin G) K01802; COG: COG3843 Type IV secretory pathway, VirD2 components (relaxase); Psort location: Cytoplasmic, score: 8.87.
  
     0.462
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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