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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47319.1KEGG: blo:BL0034 2.2e-127 ATP binding protein of ABC transporter K02056; COG: COG1129 ABC-type sugar transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.82. (509 aa)    
Predicted Functional Partners:
EDR47320.1
Hypothetical protein; KEGG: msm:MSMEG_3095 2.5e-10 D-ribose-binding periplasmic protein; COG: COG1879 ABC-type sugar transport system, periplasmic component.
 
 0.997
EDR47317.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: msm:MSMEG_4171 3.8e-36 ribose transport system permease protein RbsC; COG: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 0.994
EDR47318.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: msm:MSMEG_1710 6.4e-50 ribose transport system permease protein RbsC; COG: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.994
EDR47543.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: msm:MSMEG_4171 7.2e-58 ribose transport system permease protein RbsC; COG: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 0.954
EDR48254.1
Hypothetical protein; KEGG: msm:MSMEG_3095 1.6e-08 D-ribose-binding periplasmic protein; COG: COG1879 ABC-type sugar transport system, periplasmic component; Psort location: Cytoplasmic, score: 8.87.
 
 0.947
EDR47323.1
Sugar-binding domain protein; KEGG: msm:MSMEG_3095 3.5e-19 D-ribose-binding periplasmic protein; COG: COG1879 ABC-type sugar transport system, periplasmic component.
 
 0.927
EDR47544.1
Sugar-binding domain protein; KEGG: msm:MSMEG_3095 3.4e-28 D-ribose-binding periplasmic protein; COG: COG1879 ABC-type sugar transport system, periplasmic component.
 
 0.926
EDR46782.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: msm:MSMEG_4171 1.9e-32 ribose transport system permease protein RbsC; COG: COG4211 ABC-type glucose/galactose transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.926
EDR47981.1
Sugar-binding domain protein; KEGG: msm:MSMEG_3095 1.0e-28 D-ribose-binding periplasmic protein; COG: COG1879 ABC-type sugar transport system, periplasmic component.
 
 0.918
EDR46786.1
Hypothetical protein; KEGG: msm:MSMEG_3095 1.1e-17 D-ribose-binding periplasmic protein; COG: COG1879 ABC-type sugar transport system, periplasmic component.
 
 0.900
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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