Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
EDR47349.1KEGG: rru:Rru_A1450 2.7e-08 transcriptional regulator, ArsR family; COG: COG0640 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87. (119 aa)    
Predicted Functional Partners:
EDR47348.1
CobW/P47K family protein; KEGG: ftf:FTF1000c 1.3e-19 cobS; cobalamin (vitamin B12) synthesis protein/P47K family protein; COG: COG0523 Putative GTPases (G3E family); Psort location: Cytoplasmic, score: 8.87.
       0.773
EDR48157.1
Hypothetical protein; KEGG: lsl:LSL_0888 3.1e-41 arsC; arsenate reductase; COG: COG0394 Protein-tyrosine-phosphatase; Psort location: Cytoplasmic, score: 8.87; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.753
EDR47350.1
COG: COG0701 Predicted permeases; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.659
EDR47347.1
COG: COG0526 Thiol-disulfide isomerase and thioredoxins; Psort location: Cytoplasmic, score: 8.87.
     
 0.549
EDR47346.1
Cof-like hydrolase; KEGG: btl:BALH_4896 9.0e-28 hydrolase, haloacid dehalogenase-like family K01564; COG: COG0561 Predicted hydrolases of the HAD superfamily; Psort location: Cytoplasmic, score: 8.87.
       0.481
uppP
Undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.478
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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