STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47423.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (178 aa)    
Predicted Functional Partners:
EDR47424.1
Transcriptional regulator, PadR family; KEGG: hac:Hac_1644 0.0088 holB; DNA polymerase III delta subunit K00961; COG: COG1695 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
 
     0.949
EDR46323.1
Hypothetical protein.
  
     0.586
EDR48467.1
Hypothetical protein; KEGG: lla:L90005 2.3e-06 dltC; D-alanyl carrier protein K03367; Psort location: Cytoplasmic, score: 8.87.
  
     0.445
EDR47422.1
Hypothetical protein; COG: COG4804 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87.
       0.445
EDR47425.1
Putative stage V sporulation protein AC; COG: NOG09745 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.26.
       0.434
EDR45662.1
DNA-binding helix-turn-helix protein; KEGG: mmo:MMOB3450 0.0032 dam; adenine-specific DNA methyltransferase K06223; COG: COG1396 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
  
     0.434
EDR47857.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.432
EDR47234.1
Plasmid stabilization system protein, RelE/ParE family.
  
     0.426
EDR48179.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.26.
  
     0.413
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.