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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47433.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (44 aa)    
Predicted Functional Partners:
EDR47432.1
Tetratricopeptide repeat protein; COG: COG1729 Uncharacterized protein conserved in bacteria.
 
     0.896
EDR47435.1
Arylsulfatase; KEGG: aha:AHA_2572 8.8e-07 sulfatase; COG: COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily; Psort location: CytoplasmicMembrane, score: 9.26.
 
     0.857
folC
Bifunctional protein FolC; KEGG: bcz:BCZK4201 1.1e-59 folC; folylpolyglutamate synthase K01930; COG: COG0285 Folylpolyglutamate synthase; Psort location: Cytoplasmic, score: 8.87.
 
     0.813
valS
valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
       0.762
EDR47118.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.758
EDR46292.1
Septum formation initiator; Psort location: Cytoplasmic, score: 8.87.
  
     0.748
EDR47098.1
Hypothetical protein.
  
     0.740
EDR47537.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.727
EDR47509.1
Hypothetical protein; KEGG: ljo:LJ1840 0.0021 cell wall-associated serine proteinase K01361; Psort location: Cytoplasmic, score: 8.87.
  
     0.713
EDR46333.1
Hypothetical protein.
  
     0.692
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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