STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47446.1Hypothetical protein; KEGG: mtu:Rv1992c 0.00055 ctpG; probable cation-transporting ATPase G; COG: COG4087 Soluble P-type ATPase; Psort location: Cytoplasmic, score: 8.87. (155 aa)    
Predicted Functional Partners:
pstB-2
KEGG: vpa:VP0576 2.8e-56 phosphate ABC transporter, ATP-binding protein K02036; COG: COG1117 ABC-type phosphate transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
  
    0.766
pstC-2
Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
       0.763
EDR47444.1
COG: COG0581 ABC-type phosphate transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
       0.763
pstS-2
Phosphate binding protein; KEGG: mst:Msp_0343 1.5e-32 pstS; PstS K02040; COG: COG0226 ABC-type phosphate transport system, periplasmic component.
       0.466
EDR45678.1
LysR substrate binding domain protein; KEGG: shn:Shewana3_3435 3.0e-15 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score: 9.98; Belongs to the LysR transcriptional regulatory family.
  
     0.448
EDR48395.1
Hypothetical protein; KEGG: lma:LmjF28.1160 0.00027 vacuolar type H+ ATPase subunit, putative K02155; COG: COG2391 Predicted transporter component; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.414
EDR48396.1
Hypothetical protein; COG: NOG13230 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87; Belongs to the sulfur carrier protein TusA family.
  
     0.413
EDR47399.1
LysR substrate binding domain protein; KEGG: shn:Shewana3_3435 1.2e-14 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score: 9.98; Belongs to the LysR transcriptional regulatory family.
  
     0.409
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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