STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46946.1Protein TraX; COG: NOG14154 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99. (234 aa)    
Predicted Functional Partners:
EDR46944.1
Hypothetical protein; KEGG: lsl:LSL_1486 2.7e-51 aes; endo-1,4-beta-xylanase K01181; COG: COG0657 Esterase/lipase; Psort location: Cytoplasmic, score: 8.87.
       0.682
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.682
EDR46947.1
HAD hydrolase, family IA, variant 1; KEGG: smu:SMU.1254 2.2e-63 conserved hypothetical protein K01091; COG: COG0546 Predicted phosphatases; Psort location: Cytoplasmic, score: 8.87.
       0.675
EDR46856.1
Relaxase/mobilization nuclease domain protein; KEGG: xtr:407915 0.0022 ppig; peptidyl-prolyl isomerase G (cyclophilin G) K01802; COG: COG3843 Type IV secretory pathway, VirD2 components (relaxase); Psort location: Cytoplasmic, score: 8.87.
  
     0.561
EDR46364.1
SNARE-like domain protein; KEGG: rru:Rru_A0202 8.3e-06 phospholipase D/transphosphatidylase K01115; COG: COG0398 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.558
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
       0.455
EDR46868.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.437
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.