STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46954.1Purine catabolism regulatory protein-like family; COG: COG2508 Regulator of polyketide synthase expression; Psort location: Cytoplasmic, score: 8.87. (560 aa)    
Predicted Functional Partners:
EDR45785.1
Hypothetical protein; COG: NOG22749 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.786
EDR45778.1
Putative membrane protein FdrA; KEGG: ape:APE_1072.1 1.2e-11 succinyl-CoA synthetase alpha chain K01902; COG: COG0074 Succinyl-CoA synthetase, alpha subunit; Psort location: Cytoplasmic, score: 8.87.
 
     0.773
EDR46956.1
FAD dependent oxidoreductase; KEGG: mlo:mlr1283 5.5e-28 sarcosine dehydrogenase K00314; COG: COG0665 Glycine/D-amino acid oxidases (deaminating); Psort location: Cytoplasmic, score: 8.87.
 
     0.766
EDR45781.1
Hypothetical protein; KEGG: bur:Bcep18194_B0145 1.9e-05 esterase/lipase/thioesterase K01046; COG: COG0657 Esterase/lipase; Psort location: Cytoplasmic, score: 8.87.
 
     0.751
amaB
N-carbamoyl-L-amino-acid hydrolase; KEGG: rba:RB13304 7.6e-79 amaB; N-carbamoyl-L-amino acid amidohydrolase; COG: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; Psort location: Cytoplasmic, score: 8.87.
 
     0.724
ncs1
NCS1 nucleoside transporter family protein; COG: COG1953 Cytosine/uracil/thiamine/allantoin permeases; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.707
EDR45783.1
Putative allantoinase; KEGG: chy:CHY_0678 5.4e-69 allB; allantoinase K01466; COG: COG0044 Dihydroorotase and related cyclic amidohydrolases; Psort location: Cytoplasmic, score: 8.87.
 
     0.636
EDR45780.1
Putative allantoin catabolism protein; COG: COG3257 Uncharacterized protein, possibly involved in glyoxylate utilization; Psort location: Cytoplasmic, score: 8.87.
 
     0.609
EDR45774.1
Allantoate amidohydrolase; KEGG: oih:OB3444 4.0e-80 N-carbamoyl-L-amino acid amidohydrolase K01463; COG: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; Psort location: Cytoplasmic, score: 8.87.
 
     0.534
EDR47414.1
Hypothetical protein; COG: COG2966 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.465
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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