STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46964.1EDD domain protein, DegV family; COG: COG1307 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87. (285 aa)    
Predicted Functional Partners:
EDR47111.1
DAK2 domain fusion protein YloV; KEGG: bcz:BCZK3615 7.4e-120 dhaK; possible dihydroxyacetone-related kinase K00863; COG: COG1461 Predicted kinase related to dihydroxyacetone kinase; Psort location: Cytoplasmic, score: 8.87.
   0.996
EDR46963.1
Hypothetical protein; COG: COG2848 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87.
       0.737
EDR46962.1
ACT domain protein; KEGG: nph:NP5006A 9.7e-07 purU; formyltetrahydrofolate deformylase K01433; COG: COG3830 ACT domain-containing protein; Psort location: Cytoplasmic, score: 8.87; Belongs to the UPF0237 family.
       0.661
EDR46965.1
Acetyltransferase, GNAT family; KEGG: gox:GOX2267 9.8e-15 putative acetyltransferase K00680; COG: COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; Psort location: Cytoplasmic, score: 8.87.
       0.615
EDR46516.1
Hypothetical protein; KEGG: bcz:BCZK3615 5.0e-06 dhaK; possible dihydroxyacetone-related kinase K00863; COG: COG1461 Predicted kinase related to dihydroxyacetone kinase; Psort location: Cytoplasmic, score: 8.87.
 
   0.560
EDR48341.1
Hypothetical protein; KEGG: bcz:BCZK3615 1.9e-06 dhaK; possible dihydroxyacetone-related kinase K00863; COG: COG1461 Predicted kinase related to dihydroxyacetone kinase; Psort location: Cytoplasmic, score: 8.87.
 
   0.553
EDR47112.1
COG: COG1302 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87.
 
    0.517
EDR46961.1
Metallo-beta-lactamase domain protein; KEGG: fnu:FN0900 2.3e-38 metal dependent hydrolase; COG: COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I; Psort location: Cytoplasmic, score: 8.87.
  
    0.449
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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