STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46967.1Hypothetical protein; COG: COG4912 Predicted DNA alkylation repair enzyme; Psort location: Cytoplasmic, score: 8.87. (231 aa)    
Predicted Functional Partners:
EDR46970.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.629
EDR46968.1
YibE/F-like protein; COG: COG5438 Predicted multitransmembrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.622
EDR46969.1
YibE/F-like protein; COG: COG5438 Predicted multitransmembrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.572
EDR46966.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.536
EDR48297.1
Hypothetical protein; KEGG: cal:orf19.575 4.1e-12 HYR5; similar to HYR1 K01186; COG: KOG1075 FOG: Reverse transcriptase; Psort location: Cellwall, score: 9.01.
  
     0.432
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.