Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR46968.1YibE/F-like protein; COG: COG5438 Predicted multitransmembrane protein; Psort location: CytoplasmicMembrane, score: 9.99. (366 aa)    
Predicted Functional Partners:
EDR46969.1
YibE/F-like protein; COG: COG5438 Predicted multitransmembrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
   
0.877
EDR46970.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.654
EDR46967.1
Hypothetical protein; COG: COG4912 Predicted DNA alkylation repair enzyme; Psort location: Cytoplasmic, score: 8.87.
 
     0.621
EDR46848.1
Phage/plasmid primase, P4 family domain protein; KEGG: hwa:HQ4022A 3.5e-14 putative P4-specific DNA primase; COG: COG3378 Predicted ATPase; Psort location: Cytoplasmic, score: 8.87.
  
     0.435
EDR46966.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.409
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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