STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47000.1FtsK/SpoIIIE family protein; KEGG: pen:PSEEN2212 5.8e-117 ftsK; cell division protein FtsK; COG: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; Psort location: CytoplasmicMembrane, score: 9.99. (820 aa)    
Predicted Functional Partners:
EDR46017.1
ParB-like protein; KEGG: pub:SAR11_0354 2.2e-47 parB; chromosome partitioning protein K03497; COG: COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
  
  
 0.749
EDR47001.1
Tetratricopeptide repeat protein; KEGG: mth:MTH977 9.7e-10 endo-1,4-beta-glucanase related protein K01179; COG: COG3291 FOG: PKD repeat.
       0.704
EDR46999.1
Putative endopeptidase Clp; KEGG: cpf:CPF_1931 9.5e-56 clpP; clp protease K01358; COG: COG0740 Protease subunit of ATP-dependent Clp proteases; Psort location: Cytoplasmic, score: 8.87.
  
    0.647
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
 
   
 0.633
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
   
 0.566
mraZ
Protein MraZ; COG: COG2001 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87; Belongs to the MraZ family.
  
  
 0.562
EDR47793.1
Hypothetical protein; COG: COG1589 Cell division septal protein.
   
 
 0.551
EDR47609.1
ParB-like protein; KEGG: pub:SAR11_0354 4.0e-08 parB; chromosome partitioning protein K03497; COG: COG1475 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87; Belongs to the ParB family.
  
    0.546
EDR48069.1
Hypothetical protein; KEGG: bsu:BG10233 8.2e-15 bpr, bpf; bacillopeptidase F; COG: COG4412 Uncharacterized protein conserved in bacteria; Psort location: Extracellular, score: 9.55.
    
   0.539
EDR47647.1
Hypothetical protein; KEGG: bsu:BG10233 6.5e-18 bpr, bpf; bacillopeptidase F; COG: COG4412 Uncharacterized protein conserved in bacteria; Psort location: Extracellular, score: 9.55.
    
   0.539
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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