STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgPPhosphorylase, glycogen/starch/alpha-glucan family; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (750 aa)    
Predicted Functional Partners:
malQ
4-alpha-glucanotransferase; KEGG: cpf:CPF_2647 3.2e-158 malQ; 4-alpha-glucanotransferase K00705; COG: COG1640 4-alpha-glucanotransferase; Psort location: Cytoplasmic, score: 9.98.
 
 
 0.974
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 0.969
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
 
 0.923
glgC-2
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
 
 0.920
EDR47980.1
KEGG: ter:Tery_5016 4.9e-91 glycogen debranching enzyme GlgX K02438; COG: COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases; Psort location: Cytoplasmic, score: 8.87; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.919
glgD
Glucose-1-phosphate adenylyltransferase, GlgD subunit; KEGG: bha:BH1086 1.3e-58 glgD; required for glycogen biosynthesis K00975; COG: COG0448 ADP-glucose pyrophosphorylase; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.916
glgD-2
Glucose-1-phosphate adenylyltransferase, GlgD subunit; KEGG: tma:TM0239 6.2e-84 glucose-1-phosphate adenylyltransferase K00975; COG: COG0448 ADP-glucose pyrophosphorylase; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
 
 0.916
malQ-2
4-alpha-glucanotransferase; KEGG: ava:Ava_1822 4.7e-134 glycoside hydrolase, family 77 K00705; COG: COG1640 4-alpha-glucanotransferase; Psort location: Cytoplasmic, score: 9.98.
 
 
 0.905
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 
 0.873
glgA-2
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 
 0.873
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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