STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47043.1Pyridine nucleotide-disulfide oxidoreductase; KEGG: gox:GOX1630 1.4e-68 putative oxidoreductase K00100; COG: COG2509 Uncharacterized FAD-dependent dehydrogenases. (554 aa)    
Predicted Functional Partners:
EDR47034.1
Flavoprotein family protein; KEGG: gox:GOX1717 3.8e-16 putative oxidoreductase K00100; COG: COG2081 Predicted flavoproteins; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.546
EDR47044.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.75.
       0.533
malQ
4-alpha-glucanotransferase; KEGG: cpf:CPF_2647 3.2e-158 malQ; 4-alpha-glucanotransferase K00705; COG: COG1640 4-alpha-glucanotransferase; Psort location: Cytoplasmic, score: 9.98.
       0.529
glgP
Phosphorylase, glycogen/starch/alpha-glucan family; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
       0.529
radC
COG: COG2003 DNA repair proteins; Psort location: Cytoplasmic, score: 8.87; Belongs to the UPF0758 family.
       0.503
EDR47049.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: sde:Sde_3341 9.2e-54 PAS/PAC sensor signal transduction histidine kinase K05364; COG: COG0768 Cell division protein FtsI/penicillin-binding protein 2; Psort location: CytoplasmicMembrane, score: 9.82.
  
    0.487
mreC
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
       0.486
mreD
Rod shape-determining protein MreD; COG: NOG16883 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
       0.486
EDR47046.1
Cell shape determining protein, MreB/Mrl family; KEGG: hpa:HPAG1_1318 8.1e-43 rod shape-determining protein K01529; COG: COG1077 Actin-like ATPase involved in cell morphogenesis; Psort location: Cytoplasmic, score: 9.98.
       0.475
EDR47039.1
ABC transporter, permease protein; KEGG: hpa:HPAG1_0451 2.6e-05 molybdenum ABC transporter ModB K06022; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
       0.468
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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