STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47066.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (332 aa)    
Predicted Functional Partners:
secE
Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.614
EDR47067.1
Hypothetical protein.
       0.608
EDR48378.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.561
EDR47408.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.561
EDR47065.1
COG: COG4636 Uncharacterized protein conserved in cyanobacteria; Psort location: Cytoplasmic, score: 8.87.
       0.551
EDR47773.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.486
EDR45765.1
FeoA domain protein.
  
     0.486
EDR46590.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.482
EDR46333.1
Hypothetical protein.
  
     0.481
EDR46187.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.463
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.