Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR47080.1Amidohydrolase family protein; COG: COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold; Psort location: Cytoplasmic, score: 8.87. (263 aa)    
Predicted Functional Partners:
EDR47081.1
Aspartate kinase; KEGG: ctc:CTC02356 2.7e-129 aspartate kinase K00928; COG: COG0527 Aspartokinases; Psort location: Cytoplasmic, score: 8.87; Belongs to the aspartokinase family.
       0.768
EDR47082.1
HAD hydrolase, family IA, variant 3; KEGG: atc:AGR_C_1458 2.0e-14 conserved hypothetical protein VC1645 K01560; COG: COG1011 Predicted hydrolase (HAD superfamily); Psort location: Cytoplasmic, score: 8.87.
       0.666
EDR47083.1
YbaK/EbsC protein; COG: COG2606 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
       0.532
EDR48060.1
AMP-binding enzyme; KEGG: bca:BCE_0965 4.7e-70 AMP-binding protein K01897; COG: COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; Psort location: Cytoplasmic, score: 9.98.
 
   
 0.487
rplU
Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
       0.449
rpmA
COG: COG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
       0.421
EDR47078.1
COG: COG2868 Predicted ribosomal protein; Psort location: Cytoplasmic, score: 8.87.
       0.420
EDR47084.1
Radical SAM-linked protein; KEGG: sat:SYN_01355 2.1e-06 Fe-S oxidoreductase; COG: COG5011 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87.
       0.400
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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