Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDR47115.1Hypothetical protein. (46 aa)    
Predicted Functional Partners:
EDR47116.1
Sporulation protein YtfJ; COG: COG3874 Uncharacterized conserved protein.
       0.578
EDR47117.1
Hypothetical protein; KEGG: mma:MM1325 1.2e-05 cheA; chemotaxis protein K03407; COG: KOG1181 FOG: Low-complexity.
       0.553
EDR47118.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.553
rpmB
COG: COG0227 Ribosomal protein L28; Psort location: Cytoplasmic, score: 8.87; Belongs to the bacterial ribosomal protein bL28 family.
       0.484
EDR47119.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: mta:Moth_0911 2.6e-62 peptidoglycan glycosyltransferase K05364; COG: COG0768 Cell division protein FtsI/penicillin-binding protein 2; Psort location: CytoplasmicMembrane, score: 9.82.
       0.431
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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