STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47139.1SIS domain protein; KEGG: bte:BTH_I1550 5.1e-06 glucokinase/transcriptional regulator, RpiR family, fusion K00845; COG: COG1737 Transcriptional regulators; Psort location: Cytoplasmic, score: 8.87. (300 aa)    
Predicted Functional Partners:
EDR47138.1
Flavoprotein family protein; KEGG: gox:GOX1717 5.0e-16 putative oxidoreductase K00100; COG: COG2081 Predicted flavoproteins; Psort location: Cytoplasmic, score: 8.87.
       0.785
cmk
Cytidylate kinase; KEGG: bcl:ABC1872 4.4e-51 cmk; cytidylate kinase K00945; COG: COG0283 Cytidylate kinase; Psort location: Cytoplasmic, score: 8.87.
       0.698
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
       0.692
EDR47135.1
Putative ribosomal protein S1; KEGG: cno:NT01CX_2096 2.0e-69 RpsA K03527; COG: COG0761 Penicillin tolerance protein; Psort location: Cytoplasmic, score: 9.98.
       0.635
EDR46265.1
DnaD domain protein; COG: COG3935 Putative primosome component and related proteins; Psort location: Cytoplasmic, score: 8.87.
  
     0.478
EDR47140.1
KEGG: tte:TTE1208 1.4e-148 pycA; Pyruvate carboxylase, C-terminal domain/subunit K01960; COG: COG5016 Pyruvate/oxaloacetate carboxyltransferase; Psort location: Cytoplasmic, score: 8.87.
       0.456
EDR45909.1
Glycosyl transferase WecB/TagA/CpsF family protein; KEGG: tte:TTE2163 1.1e-09 wecG; teichoic acid biosynthesis proteins; COG: COG1922 Teichoic acid biosynthesis proteins; Psort location: Cytoplasmic, score: 8.87.
  
     0.432
EDR47142.1
Biotin-requiring enzyme; KEGG: sph:MGAS10270_Spy1010 2.1e-19 biotin carboxyl carrier protein of oxaloacetate decarboxylase K01570; COG: COG0511 Biotin carboxyl carrier protein.
 
    0.427
EDR45569.1
KEGG: cpr:CPR_0550 2.6e-163 fructose specific permease K00890; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.423
EDR47141.1
Sodium ion-translocating decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).
       0.417
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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