STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47228.1Hypothetical protein. (158 aa)    
Predicted Functional Partners:
EDR47226.1
ABC transporter substrate binding protein; COG: COG2984 ABC-type uncharacterized transport system, periplasmic component; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDR47227.1
Hypothetical protein; COG: COG2984 ABC-type uncharacterized transport system, periplasmic component.
       0.773
EDR47224.1
KEGG: reh:H16_A1397 8.3e-57 ABC-type transporter, ATPase component; COG: COG1101 ABC-type uncharacterized transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
       0.746
EDR47225.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: msm:MSMEG_3090 4.1e-07 ribose transport system permease protein RbsC; COG: COG4120 ABC-type uncharacterized transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
       0.746
dut
dUTP diphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.
       0.615
ppk1-2
Polyphosphate kinase 1; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
       0.456
EDR47230.1
Na/Pi-cotransporter II-like protein; COG: COG1283 Na+/phosphate symporter; Psort location: CytoplasmicMembrane, score: 9.99.
       0.456
EDR47231.1
Putative Phosphate-binding protein PstS 2; KEGG: mst:Msp_0343 2.1e-10 pstS; PstS K02040; COG: COG0226 ABC-type phosphate transport system, periplasmic component.
       0.456
EDR47222.1
Hypothetical protein; COG: NOG05963 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.26.
       0.416
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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