STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47234.1Plasmid stabilization system protein, RelE/ParE family. (101 aa)    
Predicted Functional Partners:
EDR47235.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.941
EDR47236.1
Hypothetical protein.
       0.746
EDR47237.1
Hypothetical protein.
       0.746
EDR46448.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.635
EDR47238.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.559
EDR45598.1
Hypothetical protein; COG: COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); Psort location: Cytoplasmic, score: 8.87.
  
     0.475
EDR48277.1
Addiction module antitoxin, RelB/DinJ family; COG: COG3077 DNA-damage-inducible protein J.
 
 
   0.465
metA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
       0.449
EDR47423.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.426
EDR45742.1
DNA-binding helix-turn-helix protein; KEGG: mmo:MMOB3450 0.00063 dam; adenine-specific DNA methyltransferase K06223; COG: COG1396 Predicted transcriptional regulators.
  
     0.425
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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