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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47235.1Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (89 aa)    
Predicted Functional Partners:
EDR47234.1
Plasmid stabilization system protein, RelE/ParE family.
 
     0.942
EDR46449.1
Toxin-antitoxin system, toxin component, RelE family.
 
     0.762
EDR46769.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.750
EDR47236.1
Hypothetical protein.
       0.746
EDR47237.1
Hypothetical protein.
       0.746
EDR46052.1
Addiction module toxin, RelE/StbE family; Psort location: Cytoplasmic, score: 8.87.
 
     0.653
EDR45585.1
Addiction module toxin, RelE/StbE family; COG: NOG13941 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.647
EDR48375.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.614
EDR47238.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.559
metA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
       0.449
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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