STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47243.1acyl-CoA thioester hydrolase, YbgC/YbaW family; KEGG: lwe:lwe1298 9.9e-22 4-hydroxybenzoyl-CoA thioesterase family protein K01076; COG: COG0824 Predicted thioesterase; Psort location: Cytoplasmic, score: 8.87. (159 aa)    
Predicted Functional Partners:
fabD
[acyl-carrier-protein] S-malonyltransferase; KEGG: cac:CAC3575 2.9e-77 fabD; malonyl CoA-acyl carrier protein transacylase K00645; COG: COG0331 (acyl-carrier-protein) S-malonyltransferase; Psort location: Cytoplasmic, score: 8.87.
 
 0.837
thrS
threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
       0.779
EDR47244.1
Oxidoreductase, aldo/keto reductase family protein; KEGG: lsl:LSL_0710 1.4e-68 oxidoreductase K00100; COG: COG0656 Aldo/keto reductases, related to diketogulonate reductase; Psort location: Cytoplasmic, score: 8.87.
       0.722
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
 
 0.667
EDR47241.1
Hypothetical protein; COG: NOG16856 non supervised orthologous group.
       0.642
EDR48467.1
Hypothetical protein; KEGG: lla:L90005 2.3e-06 dltC; D-alanyl carrier protein K03367; Psort location: Cytoplasmic, score: 8.87.
  
 0.625
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.625
fabZ
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
 
  
 0.590
EDR47211.1
Thioesterase family protein; KEGG: bba:Bd1827 7.7e-22 acyl-CoA thioester hydrolase K01076; COG: COG1607 Acyl-CoA hydrolase.
 
 
 0.586
baiA
Bile acid 7-dehydroxylase 1/3; KEGG: cpf:CPF_1154 2.4e-66 7-alpha-hydroxysteroid dehydrogenase K00076; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score: 9.98.
  
 0.581
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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