STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47246.1Hypothetical protein. (80 aa)    
Predicted Functional Partners:
EDR46189.1
Hypothetical protein; KEGG: pma:Pro0860 5.6e-05 pulO; prepilin peptidase K02236; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.762
EDR45895.1
Hypothetical protein.
  
     0.761
EDR47781.1
Hypothetical protein; KEGG: cpf:CPF_2806 4.3e-06 putative foldase protein PrsA K07533; COG: COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
     0.720
EDR47509.1
Hypothetical protein; KEGG: ljo:LJ1840 0.0021 cell wall-associated serine proteinase K01361; Psort location: Cytoplasmic, score: 8.87.
  
     0.708
EDR47098.1
Hypothetical protein.
  
     0.692
EDR47802.1
Hypothetical protein.
  
     0.676
EDR46333.1
Hypothetical protein.
  
     0.659
EDR47838.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.655
EDR46590.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.651
EDR45919.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 0.00044 serine/threonine protein kinase with TPR repeats K00908; COG: COG0457 FOG: TPR repeat.
  
     0.651
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.