Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EDR46526.1ThiF family protein; KEGG: cal:orf19.2115 2.0e-32 molybdopterin-converting factor; COG: COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1; Psort location: Cytoplasmic, score: 8.87. (258 aa)    
Predicted Functional Partners:
EDR46525.1
COG: COG1757 Na+/H+ antiporter; Psort location: CytoplasmicMembrane, score: 10.00.
       0.513
thiS
COG: COG2104 Sulfur transfer protein involved in thiamine biosynthesis; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.510
EDR47170.1
KEGG: dvu:DVUA0012 4.2e-09 nifD; nitrogenase molybdenum-iron protein alpha chain K02586; COG: COG2710 Nitrogenase molybdenum-iron protein, alpha and beta chains; Psort location: Cytoplasmic, score: 8.87.
 
      0.507
EDR48022.1
Rhodanese-like protein; KEGG: nme:NMB1023 5.0e-34 hypothetical protein K04075; COG: COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; Psort location: Cytoplasmic, score: 8.87; Belongs to the TtcA family.
 
 
 0.470
EDR46527.1
Nitroreductase family protein; KEGG: fnu:FN1254 1.9e-11 oxygen-insensitive NAD(P)H nitroreductase / dihydropteridine reductase K00357; COG: COG0778 Nitroreductase.
       0.469
EDR46349.1
ThiF family protein; KEGG: hpa:HPAG1_0799 3.4e-60 thiamine biosynthesis protein; COG: COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2; Psort location: Cytoplasmic, score: 8.87.
 
 
0.426
EDR47834.1
Peptidase, U32 family; KEGG: cac:CAC1687 7.4e-120 collagenase family protease K08303; COG: COG0826 Collagenase and related proteases; Psort location: Cytoplasmic, score: 8.87.
  
     0.411
thiG
Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
  
 0.406
EDR47121.1
Peptidase, U32 family; KEGG: ctc:CTC02275 1.2e-103 protease K08303; COG: COG0826 Collagenase and related proteases; Psort location: Cytoplasmic, score: 8.87.
  
     0.402
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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