STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46536.1Hypothetical protein. (312 aa)    
Predicted Functional Partners:
EDR46535.1
MBOAT family protein; KEGG: hne:HNE_2072 9.0e-60 algI; alginate biosynthesis protein AlgI K00680; COG: COG1696 Predicted membrane protein involved in D-alanine export; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the membrane-bound acyltransferase family.
 
    0.931
EDR48467.1
Hypothetical protein; KEGG: lla:L90005 2.3e-06 dltC; D-alanyl carrier protein K03367; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.779
EDR48465.1
AMP-binding enzyme; KEGG: cje:Cj1307 9.6e-95 putative amino acid activating enzyme K01932; COG: COG1020 Non-ribosomal peptide synthetase modules and related proteins; Psort location: Cytoplasmic, score: 9.98.
 
     0.740
folK
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
    
  0.736
EDR47307.1
LPXTG-motif cell wall anchor domain protein; KEGG: cal:orf19.4072 4.4e-10 HYR10; similar to cell surface flocculin K01186; COG: COG3210 Large exoproteins involved in heme utilization or adhesion; Psort location: Cellwall, score: 9.98.
   
 0.732
EDR45666.1
Hypothetical protein; KEGG: eci:UTI89_C4143 0.0030 putative autotransport adhesin K01423; COG: COG3210 Large exoproteins involved in heme utilization or adhesion.
   
 0.732
EDR47858.1
MBOAT family protein; KEGG: hne:HNE_2072 4.1e-71 algI; alginate biosynthesis protein AlgI K00680; COG: COG1696 Predicted membrane protein involved in D-alanine export; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the membrane-bound acyltransferase family.
 
    0.659
EDR48466.1
Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein; KEGG: rso:RS00881 3.3e-30 RSp0424; probable diaminopimelate decarboxylase protein K01586; COG: COG0019 Diaminopimelate decarboxylase; Psort location: Cytoplasmic, score: 8.87.
 
     0.637
EDR46532.1
KEGG: tma:TM1424 7.2e-35 NADH dehydrogenase I chain E K00334; COG: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; Psort location: Cytoplasmic, score: 9.98.
       0.552
EDR46533.1
4Fe-4S binding domain protein; KEGG: chy:CHY_0732 2.8e-200 hydB; Fe-hydrogenase, beta subunit K00335; COG: COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; Psort location: Cytoplasmic, score: 9.98.
       0.552
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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