Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EDR46591.1LysM domain protein; COG: COG1388 FOG: LysM repeat; Psort location: Cytoplasmic, score: 8.87. (537 aa)    
Predicted Functional Partners:
EDR46590.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.931
EDR48526.1
Hypothetical protein; COG: NOG17862 non supervised orthologous group.
  
  
 0.812
EDR46287.1
Spore coat protein, CotS family; COG: NOG09979 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.772
EDR48390.1
Putative phage head-tail adaptor; KEGG: cpf:CPF_2369 4.4e-67 subtilase family protein; COG: COG1404 Subtilisin-like serine proteases.
  
   
 0.770
EDR46310.1
LysM domain protein; KEGG: lsl:LSL_0304 0.00017 phage lysin K01185; COG: COG1652 Uncharacterized protein containing LysM domain.
  
     0.768
EDR46846.1
Peptidase, S8/S53 family; KEGG: cpf:CPF_2369 2.9e-54 subtilase family protein; COG: COG1404 Subtilisin-like serine proteases; Psort location: Cytoplasmic, score: 8.87.
  
   
 0.766
EDR47258.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.763
EDR47537.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
    0.759
EDR48048.1
COG: COG0629 Single-stranded DNA-binding protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.756
EDR47791.1
KEGG: gka:GK1126 3.2e-10 spoIIGA; protease (sporulation sigma-E factor processing peptidase); COG: NOG09744 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
    0.755
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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