Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
EDR46598.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (77 aa)    
Predicted Functional Partners:
EDR46597.1
S1 RNA binding domain protein; COG: COG2996 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87; Belongs to the CvfB family.
       0.641
EDR46292.1
Septum formation initiator; Psort location: Cytoplasmic, score: 8.87.
  
     0.615
EDR47799.1
Hypothetical protein.
  
     0.612
EDR47098.1
Hypothetical protein.
  
     0.592
EDR46312.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 7.63.
  
     0.518
EDR47586.1
Hypothetical protein.
  
     0.507
EDR46367.1
Hypothetical protein; COG: NOG16850 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.507
EDR47848.1
Hypothetical protein; KEGG: pfa:PF13_0232 5.1e-11 Casein kinase II regulatory subunit, putative K03115; COG: KOG1477 SPRY domain-containing proteins.
  
     0.506
EDR46191.1
Hypothetical protein; COG: COG1716 FOG: FHA domain; Psort location: Cytoplasmic, score: 8.87.
  
     0.506
EDR46596.1
Acyl-ACP thioesterase; KEGG: ctc:CTC00119 2.2e-26 acyl-acyl carrier protein thioesterase K01071; COG: COG3884 Acyl-ACP thioesterase; Psort location: Cytoplasmic, score: 8.87.
       0.499
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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