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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46602.1COG: COG4506 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87. (151 aa)    
Predicted Functional Partners:
argS
arginine--tRNA ligase; KEGG: ftl:FTL_1598 6.9e-140 arginyl-tRNA synthetase K01887; COG: COG0018 Arginyl-tRNA synthetase; Psort location: Cytoplasmic, score: 9.98.
  
    0.720
EDR45867.1
Hypothetical protein; COG: NOG13733 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.610
EDR47117.1
Hypothetical protein; KEGG: mma:MM1325 1.2e-05 cheA; chemotaxis protein K03407; COG: KOG1181 FOG: Low-complexity.
  
     0.605
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
       0.599
EDR45903.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.75.
  
     0.596
EDR46591.1
LysM domain protein; COG: COG1388 FOG: LysM repeat; Psort location: Cytoplasmic, score: 8.87.
 
     0.571
EDR46265.1
DnaD domain protein; COG: COG3935 Putative primosome component and related proteins; Psort location: Cytoplasmic, score: 8.87.
  
     0.520
hemZ
KEGG: cpe:CPE1935 9.2e-90 hemZ; probable coproporphyrinogen III oxidase K02495; COG: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; Psort location: Cytoplasmic, score: 9.98.
   
    0.515
psd
KEGG: cac:CAC0799 4.1e-55 psd; phosphatidylserine decarboxylase K01613; COG: COG0688 Phosphatidylserine decarboxylase; Belongs to the phosphatidylserine decarboxylase family.
   
    0.511
EDR48526.1
Hypothetical protein; COG: NOG17862 non supervised orthologous group.
  
     0.485
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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