STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR46608.1Transposase, IS605 OrfB family; COG: COG0675 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87. (384 aa)    
Predicted Functional Partners:
EDR46609.1
Resolvase, N-terminal domain protein; COG: COG2452 Predicted site-specific integrase-resolvase; Psort location: Cytoplasmic, score: 8.87.
 
    0.943
EDR47675.1
Resolvase, N-terminal domain protein; COG: COG2452 Predicted site-specific integrase-resolvase; Psort location: Cytoplasmic, score: 8.87.
 
    0.745
EDR45796.1
Hypothetical protein; COG: COG2452 Predicted site-specific integrase-resolvase; Psort location: Cytoplasmic, score: 8.87.
 
    0.739
rpsO
Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
    
   0.574
EDR46607.1
LysR substrate binding domain protein; KEGG: shn:Shewana3_3435 5.5e-21 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score: 9.65; Belongs to the LysR transcriptional regulatory family.
       0.448
proB
Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
       0.431
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.