Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
Experiments
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[Homology]
Score
EDR46613.14Fe-4S binding domain protein; KEGG: eci:UTI89_C1055 5.9e-13 yccM; putative electron transport protein YccM K00168; COG: COG0348 Polyferredoxin; Psort location: CytoplasmicMembrane, score: 9.26. (289 aa)    
Predicted Functional Partners:
EDR46611.1
Redoxin family protein; KEGG: mbo:Mb1506 0.00017 trxB1; probable thioredoxin TrxB1; COG: COG0526 Thiol-disulfide isomerase and thioredoxins.
 
    0.883
EDR45365.1
Antioxidant, AhpC/TSA family; KEGG: reh:H16_A0306 3.7e-06 bcp; peroxiredoxin K00435; COG: COG0526 Thiol-disulfide isomerase and thioredoxins.
 
  
 0.771
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.618
EDR45361.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lwe:lwe1394 6.1e-38 lisK; two-component sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.70.
 
     0.483
EDR46614.1
Hypothetical protein.
       0.421
mntP
Hypothetical protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.
       0.421
EDR45363.1
Hypothetical protein.
 
     0.415
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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