STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46641.1Hypothetical protein. (71 aa)    
Predicted Functional Partners:
EDR46642.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDR46643.1
YqaJ viral recombinase family protein; KEGG: cal:orf19.3100 0.0076 USO4; coiled-coil protein necessary for protein transport from ER to Golgi K01553; COG: COG5377 Phage-related protein, predicted endonuclease; Psort location: Cytoplasmic, score: 8.87.
       0.773
recD2-2
Helicase, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.
       0.610
EDR46640.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.451
EDR46645.1
Putative phage head-tail adaptor.
       0.442
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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