STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR46665.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (73 aa)    
Predicted Functional Partners:
EDR46666.1
Hypothetical protein.
       0.768
EDR46667.1
Toxin-antitoxin system, toxin component, HicA family; Psort location: Cytoplasmic, score: 8.87.
       0.768
EDR46668.1
Toxin-antitoxin system, antitoxin component, HicB family; COG: NOG14977 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.768
EDR46885.1
Hypothetical protein.
  
     0.732
EDR46901.1
Hypothetical protein; KEGG: hpa:HPAG1_1000 0.0049 autophosphorylating histidine kinase; COG: NOG34358 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.667
EDR46899.1
Hypothetical protein; KEGG: lac:LBA1588 0.00036 prtM; PrtM precursor K07533; Psort location: Cytoplasmic, score: 8.87.
 
     0.659
EDR46664.1
Resolvase, N-terminal domain protein; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs; Psort location: Cytoplasmic, score: 8.87.
       0.623
EDR46882.1
Relaxase/mobilization nuclease domain protein; COG: COG3843 Type IV secretory pathway, VirD2 components (relaxase).
  
    0.611
EDR46884.1
Hypothetical protein; ORF located using Blastx.
  
     0.587
EDR46874.1
Hypothetical protein; COG: NOG21981 non supervised orthologous group.
  
     0.549
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.