Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR46679.1KEGG: noc:Noc_2142 7.5e-40 ABC transporter, ATPase subunit; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49. (290 aa)    
Predicted Functional Partners:
EDR46677.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
   0.954
EDR46676.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bcz:BCZK4751 7.4e-33 resE; sensor histidine kinase; COG: COG5002 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.49.
 
     0.863
EDR46107.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
   0.792
EDR46678.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.26.
       0.776
EDR46108.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bcz:BCZK4751 3.7e-31 resE; sensor histidine kinase; COG: COG5002 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.49.
  
     0.653
EDR46675.1
KEGG: rha:RHA1_ro05622 6.1e-38 response regulator (protein-glutamate methylesterase) K07669; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
 
     0.641
EDR48104.1
Hypothetical protein; KEGG: bur:Bcep18194_A5826 4.7e-70 ABC branched-chain amino acid family transporter, ATPase subunit K01996; COG: COG0410 ABC-type branched-chain amino acid transport systems, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
     
0.635
EDR45383.1
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL2864 4.1e-48 putative transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) (partial match); COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.82.
 
    
0.589
EDR46680.1
KEGG: eci:UTI89_C2354 1.3e-12 baeR; transcriptional response regulatory protein BaeR K07664; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
       0.586
EDR47708.1
KEGG: btk:BT9727_3817 9.8e-15 transcriptional regulator, GntR family K07979; COG: COG1725 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
 
    0.578
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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