STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46683.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (125 aa)    
Predicted Functional Partners:
EDR46682.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.782
EDR46684.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.782
EDR46685.1
Hypothetical protein.
       0.782
EDR46686.1
Transcriptional regulator, AbrB family; COG: COG2002 Regulators of stationary/sporulation gene expression; Psort location: Cytoplasmic, score: 8.87.
       0.732
EDR46681.1
Hypothetical protein; KEGG: aha:AHA_0170 0.0045 waaA; 3-deoxy-D-manno-octulosonic-acid transferase.
       0.614
EDR46687.1
Hypothetical protein.
       0.554
EDR46688.1
KEGG: nmu:Nmul_A1253 1.2e-05 von Willebrand factor, type A K02448; COG: COG4548 Nitric oxide reductase activation protein; Psort location: Cytoplasmic, score: 8.87.
       0.529
EDR46689.1
DNA-binding helix-turn-helix protein.
       0.529
EDR46690.1
Hypothetical protein; KEGG: sab:SAB1265c 1.1e-11 probable nitric oxide reductase protein K00377; COG: COG4548 Nitric oxide reductase activation protein; Psort location: Cytoplasmic, score: 8.87.
       0.529
EDR46691.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.507
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.