STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46686.1Transcriptional regulator, AbrB family; COG: COG2002 Regulators of stationary/sporulation gene expression; Psort location: Cytoplasmic, score: 8.87. (172 aa)    
Predicted Functional Partners:
EDR46690.1
Hypothetical protein; KEGG: sab:SAB1265c 1.1e-11 probable nitric oxide reductase protein K00377; COG: COG4548 Nitric oxide reductase activation protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.890
EDR46688.1
KEGG: nmu:Nmul_A1253 1.2e-05 von Willebrand factor, type A K02448; COG: COG4548 Nitric oxide reductase activation protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.889
EDR46696.1
Hypothetical protein; COG: COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.772
EDR46714.1
Transglycosylase SLT domain protein; COG: COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
  
     0.744
EDR47337.1
Von Willebrand factor type A domain protein; KEGG: cal:orf19.1648 0.00031 RAD50; DNA repair protein K01553; COG: COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
  
     0.743
EDR46682.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.732
EDR46683.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.732
EDR46684.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.732
EDR46685.1
Hypothetical protein.
       0.732
EDR45955.1
Hypothetical protein; KEGG: azo:azo2810 1.3e-06 conserved hypothetical protein K01010; COG: NOG13526 non supervised orthologous group.
  
     0.705
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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