STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46693.1Hypothetical protein. (84 aa)    
Predicted Functional Partners:
EDR46692.1
Single-strand binding family protein; KEGG: xom:XOO_2030 0.00013 XOO2030; pseudouridylate synthase K06178; COG: KOG3544 Collagens (type IV and type XIII), and related proteins.
       0.648
EDR46691.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.623
EDR46690.1
Hypothetical protein; KEGG: sab:SAB1265c 1.1e-11 probable nitric oxide reductase protein K00377; COG: COG4548 Nitric oxide reductase activation protein; Psort location: Cytoplasmic, score: 8.87.
       0.595
EDR46688.1
KEGG: nmu:Nmul_A1253 1.2e-05 von Willebrand factor, type A K02448; COG: COG4548 Nitric oxide reductase activation protein; Psort location: Cytoplasmic, score: 8.87.
       0.594
EDR46689.1
DNA-binding helix-turn-helix protein.
       0.594
EDR46687.1
Hypothetical protein.
       0.568
EDR46694.1
Response regulator receiver domain protein; KEGG: ava:Ava_3369 1.5e-34 two component transcriptional regulator, winged helix family; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
       0.565
EDR46686.1
Transcriptional regulator, AbrB family; COG: COG2002 Regulators of stationary/sporulation gene expression; Psort location: Cytoplasmic, score: 8.87.
       0.443
EDR46695.1
KEGG: fal:FRAAL1877 1.6e-37 putative ABC transporter ATP-binding protein; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
       0.420
EDR46696.1
Hypothetical protein; COG: COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
       0.420
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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