STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46700.1Hypothetical protein; COG: NOG13196 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (144 aa)    
Predicted Functional Partners:
EDR46701.1
COG: COG3304 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.26.
       0.782
EDR46702.1
Hypothetical protein; COG: NOG09581 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.781
EDR46703.1
KEGG: lin:lin1355 0.0057 hypothetical zinc metalloprotease.
       0.781
EDR46696.1
Hypothetical protein; COG: COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.536
EDR46695.1
KEGG: fal:FRAAL1877 1.6e-37 putative ABC transporter ATP-binding protein; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
     0.462
EDR46697.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ctc:CTC00159 1.3e-35 sensory transduction protein kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: Cytoplasmic, score: 9.36.
 
     0.450
EDR46698.1
Hypothetical protein.
       0.430
EDR46699.1
COG: COG3309 Uncharacterized virulence-associated protein D; Psort location: Cytoplasmic, score: 8.87.
       0.430
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.