Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EDR46711.1KEGG: ljo:LJ1840 0.0020 cell wall-associated serine proteinase K01361; COG: COG4932 Predicted outer membrane protein; Psort location: Cellwall, score: 9.25. (1196 aa)    
Predicted Functional Partners:
EDR46714.1
Transglycosylase SLT domain protein; COG: COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
 
  
 0.846
EDR47098.1
Hypothetical protein.
 
 
 
 0.790
EDR46509.1
NlpC/P60 family protein; KEGG: sfl:SF1683 5.6e-13 ydhO; putative lipoprotein K01183; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins); Psort location: Extracellular, score: 9.73.
 
  
 0.685
EDR48440.1
Hypothetical protein; COG: COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); Psort location: Cytoplasmic, score: 8.87.
  
    0.683
EDR47848.1
Hypothetical protein; KEGG: pfa:PF13_0232 5.1e-11 Casein kinase II regulatory subunit, putative K03115; COG: KOG1477 SPRY domain-containing proteins.
  
 
 
 0.676
EDR46510.1
NlpC/P60 family protein; KEGG: bce:BC5234 3.6e-13 N-acetylmuramoyl-L-alanine amidase K01446; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins); Psort location: Extracellular, score: 9.73.
 
  
 0.674
EDR46712.1
Hypothetical protein; KEGG: ddi:DDB0167703 5.1e-05 hypothetical protein K01971; COG: COG3451 Type IV secretory pathway, VirB4 components.
 
     0.625
EDR48441.1
CHAP domain protein; COG: COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
  
    0.547
EDR46690.1
Hypothetical protein; KEGG: sab:SAB1265c 1.1e-11 probable nitric oxide reductase protein K00377; COG: COG4548 Nitric oxide reductase activation protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.540
EDR45659.1
Replication initiation factor; COG: COG2946 Putative phage replication protein RstA; Psort location: Cytoplasmic, score: 8.87.
  
     0.539
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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