STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46732.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (175 aa)    
Predicted Functional Partners:
EDR46731.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.794
EDR46730.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.499
EDR46729.1
TraG/TraD family protein; COG: COG3505 Type IV secretory pathway, VirD4 components.
       0.478
EDR46728.1
COG: COG0539 Ribosomal protein S1; Psort location: Cytoplasmic, score: 8.87.
       0.472
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.