STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46741.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (123 aa)    
Predicted Functional Partners:
EDR46739.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
 
     0.946
EDR46740.1
Site-specific recombinase, phage integrase family; COG: COG0582 Integrase; Psort location: Cytoplasmic, score: 8.87; Belongs to the 'phage' integrase family.
 
     0.943
EDR46738.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.871
EDR46744.1
Putative plasmid recombination enzyme.
 
     0.781
EDR46745.1
Hypothetical protein; KEGG: cal:orf19.2684 1.2e-06 SLK192; conserved coiled-coil protein K00870; COG: KOG4809 Rab6 GTPase-interacting protein involved in endosome-to-TGN transport; Psort location: Cytoplasmic, score: 8.87.
 
     0.754
EDR46758.1
Hypothetical protein.
  
     0.716
EDR46742.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.675
EDR46868.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.520
EDR46068.1
Hypothetical protein; COG: COG1396 Predicted transcriptional regulators.
  
     0.479
EDR46743.1
Hypothetical protein.
       0.449
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.