STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46748.1Hypothetical protein; KEGG: sth:STH2525 2.7e-05 type II restriction-modification system DNA methylase K07319; COG: COG0863 DNA modification methylase. (182 aa)    
Predicted Functional Partners:
dam
DNA adenine methylase; KEGG: smu:SMU.504 7.7e-54 dam; putative site-specific DNA-methyltransferase K06223; COG: COG0338 Site-specific DNA methylase.
 
   
 0.892
EDR46753.1
DpmII restriction endonuclease; Recognizes the double-stranded unmethylated sequence GATC and cleaves before G-1; Belongs to the type II restriction enzyme DpnII family.
 
   
 0.891
EDR46751.1
KEGG: smu:SMU.505 4.0e-96 putative adenine-specific DNA methylase K07319; COG: COG0863 DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
   
 0.702
EDR46746.1
COG: COG3066 DNA mismatch repair protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.515
EDR46750.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.515
EDR46747.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.470
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.