STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46753.1DpmII restriction endonuclease; Recognizes the double-stranded unmethylated sequence GATC and cleaves before G-1; Belongs to the type II restriction enzyme DpnII family. (285 aa)    
Predicted Functional Partners:
EDR46751.1
KEGG: smu:SMU.505 4.0e-96 putative adenine-specific DNA methylase K07319; COG: COG0863 DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.964
dam
DNA adenine methylase; KEGG: smu:SMU.504 7.7e-54 dam; putative site-specific DNA-methyltransferase K06223; COG: COG0338 Site-specific DNA methylase.
 
    0.917
EDR46748.1
Hypothetical protein; KEGG: sth:STH2525 2.7e-05 type II restriction-modification system DNA methylase K07319; COG: COG0863 DNA modification methylase.
 
   
 0.891
EDR46752.1
COG: COG1715 Restriction endonuclease; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDR46754.1
COG: COG4916 Uncharacterized protein containing a TIR (Toll-Interleukin 1-resistance) domain.
       0.729
EDR46750.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.559
EDR46892.1
KEGG: sth:STH334 7.3e-65 DNA modification methylase M.SthI K07319; COG: COG0863 DNA modification methylase; Psort location: Cytoplasmic, score: 8.87; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.529
EDR46755.1
Hypothetical protein; COG: NOG18072 non supervised orthologous group.
       0.417
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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