STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46769.1Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (82 aa)    
Predicted Functional Partners:
EDR46770.1
Addiction module toxin, RelE/StbE family; Psort location: Cytoplasmic, score: 8.87.
 
     0.940
EDR47235.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.750
EDR46052.1
Addiction module toxin, RelE/StbE family; Psort location: Cytoplasmic, score: 8.87.
 
     0.553
EDR45585.1
Addiction module toxin, RelE/StbE family; COG: NOG13941 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.543
EDR46449.1
Toxin-antitoxin system, toxin component, RelE family.
 
     0.526
EDR47458.1
Hypothetical protein; COG: NOG25267 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.514
EDR46767.1
DNA-binding helix-turn-helix protein; COG: NOG16841 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.496
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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