STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46774.1HAD hydrolase, family IA, variant 3; KEGG: vfi:VFA0937 1.4e-24 phosphoglycolate phosphatase K01091; COG: COG0637 Predicted phosphatase/phosphohexomutase; Psort location: Cytoplasmic, score: 8.87. (216 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
  0.800
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
  0.780
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.756
EDR48283.1
Competence/damage-inducible domain protein CinA; COG: COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Psort location: Cytoplasmic, score: 8.87; Belongs to the CinA family.
    
  0.743
EDR48294.1
Hypothetical protein; COG: COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Psort location: Cytoplasmic, score: 8.87; Belongs to the CinA family.
    
  0.743
EDR46775.1
Hypothetical protein; COG: NOG21159 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
       0.727
EDR46776.1
Hydantoinase/oxoprolinase; KEGG: nph:NP6218A 3.6e-29 hyuA_2; N-methylhydantoinase (ATP-hydrolyzing) A 2 K01473; COG: COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit; Psort location: Cytoplasmic, score: 8.87.
       0.690
dlgD
3-dehydro-L-gulonate 2-dehydrogenase; KEGG: ecc:c4396 3.3e-78 yiaK; hypothetical oxidoreductase yiaK K08092; COG: COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family.
       0.661
EDR46777.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.559
EDR46778.1
YhcH/YjgK/YiaL family protein; COG: COG2731 Beta-galactosidase, beta subunit; Psort location: Cytoplasmic, score: 8.87.
       0.519
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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