Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDR46783.1Response regulator receiver domain protein; KEGG: ava:Ava_2028 4.1e-15 two component transcriptional regulator, LuxR family; COG: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; Psort location: Cytoplasmic, score: 9.98. (534 aa)    
Predicted Functional Partners:
EDR46784.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bha:BH3447 2.0e-64 two-component sensor histidine kinase K07718; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
  
 0.953
EDR46785.1
Hypothetical protein; COG: COG1879 ABC-type sugar transport system, periplasmic component.
 
     0.940
EDR46786.1
Hypothetical protein; KEGG: msm:MSMEG_3095 1.1e-17 D-ribose-binding periplasmic protein; COG: COG1879 ABC-type sugar transport system, periplasmic component.
 
     0.925
EDR46787.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDR46782.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: msm:MSMEG_4171 1.9e-32 ribose transport system permease protein RbsC; COG: COG4211 ABC-type glucose/galactose transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.751
mglB
Galactose/glucose-binding lipoprotein; COG: COG1879 ABC-type sugar transport system, periplasmic component.
 
     0.740
galT
UTP--hexose-1-phosphate uridylyltransferase; KEGG: cac:CAC2961 1.1e-143 galT; galactose-1-phosphate uridyltransferase K00964; COG: COG4468 Galactose-1-phosphate uridyltransferase; Psort location: Cytoplasmic, score: 8.87.
 
     0.611
EDR46781.1
KEGG: tde:TDE2216 6.0e-173 mglA; galactoside ABC transporter, ATP-binding protein K02056; COG: COG1129 ABC-type sugar transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
    0.582
EDR46788.1
GHMP kinase, N-terminal domain protein; KEGG: dde:Dde_3653 3.7e-70 galactokinase K00849; COG: COG0153 Galactokinase; Psort location: Cytoplasmic, score: 8.87; Belongs to the GHMP kinase family.
       0.576
EDR48498.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: spj:MGAS2096_Spy1107 1.3e-42 two-component system histidine kinase; COG: COG0642 Signal transduction histidine kinase.
  
 
   0.502
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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